This problem occurs in the regular desktop theme ("So Fresh, So Clean" now). Interesting, but I tried the mobile version of our forum on my Android smartphone, and the problem doesn't occur when I start to write a new PM.
As for updating forum source files, if a new update is not big, I compare the files using the sync tool in Total Commander and upload the changed files then. If an update is big enough, I even remove all forum source and bin files and re-upload all folders again even if most files are the same.
What source files/folders are responsible for the PM functionality? I can re-check them again using even deeper file contents comparison in Total Commander and upload the changed file if I find ones.